Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.08□□□□□ -0.48
Vsx2Q61412 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.08□□□□□ -0.48
Vsx2Q61412 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Gm15370-201ENSMUST00000117158 253 ntBASIC12.08□□□□□ -0.48
Vsx2Q61412 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.08□□□□□ -0.48
Vsx2Q61412 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Vsx2Q61412 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.08□□□□□ -0.48
Vsx2Q61412 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vsx2Q61412 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Vsx2Q61412 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.07□□□□□ -0.48
Vsx2Q61412 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm12241-201ENSMUST00000118330 726 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm13786-201ENSMUST00000122371 333 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Mir8109-201ENSMUST00000184375 117 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm38266-201ENSMUST00000194931 421 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm9368-201ENSMUST00000219348 831 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm22058-201ENSMUST00000083393 310 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.07□□□□□ -0.48
Vsx2Q61412 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Vsx2Q61412 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Vsx2Q61412 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vsx2Q61412 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.06□□□□□ -0.48
Vsx2Q61412 Gm10434-201ENSMUST00000101158 471 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Gm4986-201ENSMUST00000119731 549 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Gm13316-201ENSMUST00000140537 691 ntBASIC12.06□□□□□ -0.48
Vsx2Q61412 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vsx2Q61412 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vsx2Q61412 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms