Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Slc6a4Q60857 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Gm11989-201ENSMUST00000117240 672 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 Gm11362-201ENSMUST00000118838 850 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 Gm26461-201ENSMUST00000175064 290 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Rps4l-202ENSMUST00000204242 789 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.66□□□□□ -0.38
Slc6a4Q60857 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Slc6a4Q60857 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Gm12217-201ENSMUST00000118858 696 ntBASIC12.65□□□□□ -0.38
Slc6a4Q60857 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.65□□□□□ -0.38
Slc6a4Q60857 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Slc6a4Q60857 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms