Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
ClpbQ60649 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.9□□□□□ -0.5
ClpbQ60649 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.9□□□□□ -0.5
ClpbQ60649 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
ClpbQ60649 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Gm2991-201ENSMUST00000173338 480 ntBASIC11.9□□□□□ -0.5
ClpbQ60649 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
ClpbQ60649 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.9□□□□□ -0.5
ClpbQ60649 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.9□□□□□ -0.5
ClpbQ60649 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.9□□□□□ -0.5
ClpbQ60649 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ClpbQ60649 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.9□□□□□ -0.5
ClpbQ60649 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClpbQ60649 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
ClpbQ60649 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
ClpbQ60649 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ClpbQ60649 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.89□□□□□ -0.51
ClpbQ60649 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.89□□□□□ -0.51
ClpbQ60649 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.89□□□□□ -0.51
ClpbQ60649 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
ClpbQ60649 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.89□□□□□ -0.51
ClpbQ60649 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.89□□□□□ -0.51
ClpbQ60649 Gm6334-201ENSMUST00000207083 228 ntBASIC11.89□□□□□ -0.51
ClpbQ60649 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.89□□□□□ -0.51
ClpbQ60649 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.89□□□□□ -0.51
ClpbQ60649 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Gm8227-201ENSMUST00000223306 571 ntBASIC11.89□□□□□ -0.51
ClpbQ60649 Cts7-204ENSMUST00000225321 1257 ntBASIC11.89□□□□□ -0.51
ClpbQ60649 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.89□□□□□ -0.51
ClpbQ60649 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
ClpbQ60649 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
ClpbQ60649 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
ClpbQ60649 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
ClpbQ60649 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.88□□□□□ -0.51
ClpbQ60649 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.88□□□□□ -0.51
ClpbQ60649 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.88□□□□□ -0.51
ClpbQ60649 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
ClpbQ60649 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.88□□□□□ -0.51
ClpbQ60649 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
ClpbQ60649 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
ClpbQ60649 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.88□□□□□ -0.51
ClpbQ60649 Gm38341-201ENSMUST00000195357 515 ntBASIC11.88□□□□□ -0.51
ClpbQ60649 Gm7783-201ENSMUST00000204795 781 ntBASIC11.88□□□□□ -0.51
ClpbQ60649 Morn2-202ENSMUST00000227729 656 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms