Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rnf20Q5DTM8 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Gm38002-201ENSMUST00000193255 180 ntBASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 AY702102-202ENSMUST00000194651 1173 ntBASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Rnf20Q5DTM8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Gm14999-201ENSMUST00000121039 624 ntBASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Mospd4-201ENSMUST00000180618 576 ntBASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Gm19309-201ENSMUST00000218295 205 ntBASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Rnf20Q5DTM8 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm2606-201ENSMUST00000100754 1002 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm42627-201ENSMUST00000197347 224 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.71□□□□□ -0.05
Rnf20Q5DTM8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf20Q5DTM8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf20Q5DTM8 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.71□□□□□ -0.06
Rnf20Q5DTM8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Rnf20Q5DTM8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Rnf20Q5DTM8 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf20Q5DTM8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.7□□□□□ -0.06
Rnf20Q5DTM8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rnf20Q5DTM8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms