Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn2bQ56A07 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gm11964-201ENSMUST00000120982 444 ntBASIC12.24□□□□□ -0.45
Scn2bQ56A07 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Snora78-201ENSMUST00000158630 128 ntBASIC12.24□□□□□ -0.45
Scn2bQ56A07 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gm27682-201ENSMUST00000183930 110 ntBASIC12.24□□□□□ -0.45
Scn2bQ56A07 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Scn2bQ56A07 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.24□□□□□ -0.45
Scn2bQ56A07 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.24□□□□□ -0.45
Scn2bQ56A07 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn2bQ56A07 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Gm5370-201ENSMUST00000187187 574 ntBASIC12.23□□□□□ -0.45
Scn2bQ56A07 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn2bQ56A07 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.22□□□□□ -0.45
Scn2bQ56A07 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.22□□□□□ -0.45
Scn2bQ56A07 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Gm12957-201ENSMUST00000117835 377 ntBASIC12.22□□□□□ -0.45
Scn2bQ56A07 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Gm26927-201ENSMUST00000182385 965 ntBASIC12.22□□□□□ -0.45
Scn2bQ56A07 Gm9022-201ENSMUST00000182482 992 ntBASIC12.22□□□□□ -0.45
Scn2bQ56A07 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.22□□□□□ -0.45
Scn2bQ56A07 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms