Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Arhgef40Q3UPH7 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Arhgef40Q3UPH7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Arhgef40Q3UPH7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Arhgef40Q3UPH7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Arhgef40Q3UPH7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Arhgef40Q3UPH7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Arhgef40Q3UPH7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 AC126799.1-201ENSMUST00000221976 246 ntBASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Gm17213-201ENSMUST00000165161 1360 ntBASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Gm12516-201ENSMUST00000120819 385 ntBASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Gm43610-201ENSMUST00000199117 365 ntBASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 AC166341.2-201ENSMUST00000220571 120 ntBASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Arhgef40Q3UPH7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Gm5780-201ENSMUST00000217774 1834 ntBASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Gm14219-201ENSMUST00000120414 288 ntBASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Gm4879-201ENSMUST00000122190 1272 ntBASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Arhgef40Q3UPH7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Mir671-201ENSMUST00000102432 98 ntBASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Gm13182-201ENSMUST00000122241 312 ntBASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Gm8459-201ENSMUST00000162504 760 ntBASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Gm6722-201ENSMUST00000221586 390 ntBASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Arhgef40Q3UPH7 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Adra1a-206ENSMUST00000225182 2337 ntBASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Arhgef40Q3UPH7 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms