Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Brf2Q3UAW9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Gm13736-201ENSMUST00000119272 253 ntBASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Gm44882-201ENSMUST00000205702 802 ntBASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Brf2Q3UAW9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Brf2Q3UAW9 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm6023-201ENSMUST00000118217 606 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm9083-201ENSMUST00000120423 819 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Mir1982-201ENSMUST00000157368 74 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Snora78-201ENSMUST00000158630 128 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm27023-201ENSMUST00000182372 285 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm27390-201ENSMUST00000184516 176 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm37008-201ENSMUST00000195712 319 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm43433-201ENSMUST00000196573 481 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Brf2Q3UAW9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms