Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm18555-201ENSMUST00000197935 584 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm35412-201ENSMUST00000220437 999 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm8876-201ENSMUST00000120768 1122 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 AC154669.1-201ENSMUST00000224405 482 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm43045-201ENSMUST00000198725 2095 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm13002-201ENSMUST00000119286 682 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm14153-201ENSMUST00000119923 1139 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm20281-201ENSMUST00000188225 267 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm44605-201ENSMUST00000206892 949 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm37297-201ENSMUST00000192974 2384 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm37131-201ENSMUST00000192502 1561 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 CT010480.4-201ENSMUST00000224654 2283 ntBASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Ush2AQ2QI47 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm25145-201ENSMUST00000177640 110 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm27316-201ENSMUST00000184884 277 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm29783-201ENSMUST00000219398 369 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 AC127583.1-201ENSMUST00000224351 540 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Ermard-209ENSMUST00000226561 1019 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm4953-201ENSMUST00000077309 483 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm44414-201ENSMUST00000203660 2109 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm24231-201ENSMUST00000104315 133 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ush2AQ2QI47 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms