Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.19□□□□□ -0.46
Sox4Q06831 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sox4Q06831 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sox4Q06831 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.18□□□□□ -0.46
Sox4Q06831 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.18□□□□□ -0.46
Sox4Q06831 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Sox4Q06831 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Sox4Q06831 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Sox4Q06831 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox4Q06831 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.18□□□□□ -0.46
Sox4Q06831 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.18□□□□□ -0.46
Sox4Q06831 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Sox4Q06831 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.18□□□□□ -0.46
Sox4Q06831 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox4Q06831 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox4Q06831 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Sox4Q06831 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sox4Q06831 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sox4Q06831 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Sox4Q06831 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.17□□□□□ -0.46
Sox4Q06831 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox4Q06831 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.17□□□□□ -0.46
Sox4Q06831 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm14109-201ENSMUST00000118814 309 ntBASIC12.17□□□□□ -0.46
Sox4Q06831 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm25668-201ENSMUST00000157700 129 ntBASIC12.17□□□□□ -0.46
Sox4Q06831 Gm9630-201ENSMUST00000178304 885 ntBASIC12.17□□□□□ -0.46
Sox4Q06831 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.17□□□□□ -0.46
Sox4Q06831 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox4Q06831 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm10312-201ENSMUST00000078515 489 ntBASIC12.17□□□□□ -0.46
Sox4Q06831 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.17□□□□□ -0.46
Sox4Q06831 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sox4Q06831 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.17□□□□□ -0.46
Sox4Q06831 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.17□□□□□ -0.46
Sox4Q06831 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sox4Q06831 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sox4Q06831 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox4Q06831 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms