Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.4□□□□□ -0.42
Col9a1Q05722 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.4□□□□□ -0.42
Col9a1Q05722 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col9a1Q05722 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Col9a1Q05722 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a1Q05722 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a1Q05722 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a1Q05722 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a1Q05722 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a1Q05722 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col9a1Q05722 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm42942-201ENSMUST00000196086 1328 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm44090-201ENSMUST00000204669 1834 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm14644-201ENSMUST00000116671 647 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm14746-201ENSMUST00000120309 741 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm24954-201ENSMUST00000178831 110 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm7719-201ENSMUST00000182374 975 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm20574-201ENSMUST00000182867 917 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm43997-201ENSMUST00000203986 1005 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm6390-201ENSMUST00000215034 589 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.39□□□□□ -0.43
Col9a1Q05722 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Olfr1032-203ENSMUST00000111589 1393 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col9a1Q05722 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.39□□□□□ -0.43
Col9a1Q05722 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col9a1Q05722 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm43747-201ENSMUST00000201412 1330 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm15403-201ENSMUST00000119343 1227 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm13204-201ENSMUST00000120110 821 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm13341-201ENSMUST00000120780 672 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm12906-201ENSMUST00000154610 441 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm23045-201ENSMUST00000175041 96 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm8100-201ENSMUST00000182906 988 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm28064-201ENSMUST00000185639 858 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm6140-201ENSMUST00000192494 966 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm43489-201ENSMUST00000196810 993 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms