Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.24□□□□□ -0.29
VcpQ01853 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Gm8738-201ENSMUST00000172606 329 ntBASIC13.24□□□□□ -0.29
VcpQ01853 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.24□□□□□ -0.29
VcpQ01853 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.24□□□□□ -0.29
VcpQ01853 Gm44262-201ENSMUST00000204969 372 ntBASIC13.24□□□□□ -0.29
VcpQ01853 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.24□□□□□ -0.29
VcpQ01853 Gm45770-201ENSMUST00000212105 616 ntBASIC13.24□□□□□ -0.29
VcpQ01853 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.24□□□□□ -0.29
VcpQ01853 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VcpQ01853 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.24□□□□□ -0.29
VcpQ01853 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.24□□□□□ -0.29
VcpQ01853 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.24□□□□□ -0.29
VcpQ01853 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VcpQ01853 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.23□□□□□ -0.29
VcpQ01853 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VcpQ01853 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.23□□□□□ -0.29
VcpQ01853 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.23□□□□□ -0.29
VcpQ01853 Gm14665-201ENSMUST00000122294 557 ntBASIC13.23□□□□□ -0.29
VcpQ01853 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Gm43058-201ENSMUST00000197645 625 ntBASIC13.23□□□□□ -0.29
VcpQ01853 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
VcpQ01853 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VcpQ01853 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VcpQ01853 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.23□□□□□ -0.29
VcpQ01853 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcpQ01853 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.22□□□□□ -0.29
VcpQ01853 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.22□□□□□ -0.29
VcpQ01853 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Gm13611-201ENSMUST00000118269 318 ntBASIC13.22□□□□□ -0.29
VcpQ01853 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.22□□□□□ -0.29
VcpQ01853 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VcpQ01853 Gm13665-201ENSMUST00000120830 528 ntBASIC13.22□□□□□ -0.29
VcpQ01853 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
VcpQ01853 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcpQ01853 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.22□□□□□ -0.29
VcpQ01853 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.22□□□□□ -0.29
VcpQ01853 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms