Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm28693-202ENSMUST00000190758 331 ntBASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Thumpd3P97770 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.61□□□□□ -0.39
Thumpd3P97770 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Thumpd3P97770 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Gm15198-201ENSMUST00000117283 177 ntBASIC12.6□□□□□ -0.39
Thumpd3P97770 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.6□□□□□ -0.39
Thumpd3P97770 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Gm9630-201ENSMUST00000178304 885 ntBASIC12.6□□□□□ -0.39
Thumpd3P97770 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Gm37922-201ENSMUST00000195596 455 ntBASIC12.6□□□□□ -0.39
Thumpd3P97770 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.6□□□□□ -0.39
Thumpd3P97770 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.6□□□□□ -0.39
Thumpd3P97770 Gm6013-201ENSMUST00000212264 699 ntBASIC12.6□□□□□ -0.39
Thumpd3P97770 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Gm7399-201ENSMUST00000032395 858 ntBASIC12.6□□□□□ -0.39
Thumpd3P97770 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Mir339-201ENSMUST00000083659 96 ntBASIC12.6□□□□□ -0.39
Thumpd3P97770 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Thumpd3P97770 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Thumpd3P97770 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.59□□□□□ -0.39
Thumpd3P97770 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm11618-201ENSMUST00000117946 267 ntBASIC12.59□□□□□ -0.39
Thumpd3P97770 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm27682-201ENSMUST00000183930 110 ntBASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Gm10268-201ENSMUST00000085340 555 ntBASIC12.59□□□□□ -0.39
Thumpd3P97770 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.59□□□□□ -0.39
Thumpd3P97770 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Thumpd3P97770 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms