Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gm25881-201ENSMUST00000157783 103 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm22138-201ENSMUST00000158748 128 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm28071-201ENSMUST00000190355 478 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm807-202ENSMUST00000224929 408 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cacna1aP97445 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.44□□□□□ -0.58
Cacna1aP97445 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Cacna1aP97445 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cacna1aP97445 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.43□□□□□ -0.58
Cacna1aP97445 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.43□□□□□ -0.58
Cacna1aP97445 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.43□□□□□ -0.58
Cacna1aP97445 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Gm42518-201ENSMUST00000196277 938 ntBASIC11.43□□□□□ -0.58
Cacna1aP97445 Gm5340-201ENSMUST00000203733 880 ntBASIC11.43□□□□□ -0.58
Cacna1aP97445 Gm9463-201ENSMUST00000206707 601 ntBASIC11.43□□□□□ -0.58
Cacna1aP97445 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.43□□□□□ -0.58
Cacna1aP97445 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Cacna1aP97445 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Gm15703-201ENSMUST00000120250 880 ntBASIC11.42□□□□□ -0.58
Cacna1aP97445 Gm15595-201ENSMUST00000120840 961 ntBASIC11.42□□□□□ -0.58
Cacna1aP97445 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.42□□□□□ -0.58
Cacna1aP97445 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Cacna1aP97445 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Cacna1aP97445 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cacna1aP97445 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms