Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Vps45P97390 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vps45P97390 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps45P97390 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps45P97390 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps45P97390 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps45P97390 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps45P97390 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps45P97390 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Vps45P97390 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Gm13736-201ENSMUST00000119272 253 ntBASIC12.82□□□□□ -0.36
Vps45P97390 Gm13315-201ENSMUST00000120376 991 ntBASIC12.82□□□□□ -0.36
Vps45P97390 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps45P97390 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.82□□□□□ -0.36
Vps45P97390 Rmrp-201ENSMUST00000157463 271 ntBASIC12.82□□□□□ -0.36
Vps45P97390 Gm38317-201ENSMUST00000195564 343 ntBASIC12.82□□□□□ -0.36
Vps45P97390 Gm44967-201ENSMUST00000207047 631 ntBASIC12.82□□□□□ -0.36
Vps45P97390 Gm5904-201ENSMUST00000210286 865 ntBASIC12.82□□□□□ -0.36
Vps45P97390 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps45P97390 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.82□□□□□ -0.36
Vps45P97390 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.82□□□□□ -0.36
Vps45P97390 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps45P97390 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps45P97390 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Vps45P97390 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps45P97390 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.82□□□□□ -0.36
Vps45P97390 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps45P97390 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps45P97390 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Vps45P97390 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.81□□□□□ -0.36
Vps45P97390 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Vps45P97390 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps45P97390 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps45P97390 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Gm7857-201ENSMUST00000117957 358 ntBASIC12.81□□□□□ -0.36
Vps45P97390 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps45P97390 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps45P97390 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Gm44405-201ENSMUST00000198952 126 ntBASIC12.81□□□□□ -0.36
Vps45P97390 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps45P97390 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.81□□□□□ -0.36
Vps45P97390 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.81□□□□□ -0.36
Vps45P97390 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps45P97390 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.81□□□□□ -0.36
Vps45P97390 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps45P97390 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps45P97390 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms