Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Gm13316-201ENSMUST00000140537 691 ntBASIC13.58□□□□□ -0.24
Lig3P97386 Gm13570-201ENSMUST00000140763 309 ntBASIC13.58□□□□□ -0.24
Lig3P97386 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.58□□□□□ -0.24
Lig3P97386 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.58□□□□□ -0.24
Lig3P97386 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Lig3P97386 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lig3P97386 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lig3P97386 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Lig3P97386 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Lig3P97386 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lig3P97386 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.57□□□□□ -0.24
Lig3P97386 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.57□□□□□ -0.24
Lig3P97386 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.57□□□□□ -0.24
Lig3P97386 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.57□□□□□ -0.24
Lig3P97386 Gm25732-201ENSMUST00000175168 60 ntBASIC13.57□□□□□ -0.24
Lig3P97386 Gm7593-201ENSMUST00000187246 644 ntBASIC13.57□□□□□ -0.24
Lig3P97386 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.57□□□□□ -0.24
Lig3P97386 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.57□□□□□ -0.24
Lig3P97386 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.57□□□□□ -0.24
Lig3P97386 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.57□□□□□ -0.24
Lig3P97386 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.57□□□□□ -0.24
Lig3P97386 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lig3P97386 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lig3P97386 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Lig3P97386 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.57□□□□□ -0.24
Lig3P97386 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lig3P97386 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Lig3P97386 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Lig3P97386 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Lig3P97386 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Lig3P97386 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Lig3P97386 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Gm12616-201ENSMUST00000118594 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 Gm12624-201ENSMUST00000177615 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm12621-201ENSMUST00000177760 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm12615-201ENSMUST00000177970 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm12622-201ENSMUST00000177975 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm12627-201ENSMUST00000178412 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm12625-201ENSMUST00000179122 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm12614-201ENSMUST00000179586 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm12613-201ENSMUST00000180323 382 ntBASIC13.56□□□□□ -0.24
Lig3P97386 Gm27023-201ENSMUST00000182372 285 ntBASIC13.56□□□□□ -0.24
Lig3P97386 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.56□□□□□ -0.24
Lig3P97386 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.56□□□□□ -0.24
Lig3P97386 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lig3P97386 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms