Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trim43bP86448 Gm42693-201ENSMUST00000196779 631 ntBASIC12.75□□□□□ -0.37
Trim43bP86448 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.75□□□□□ -0.37
Trim43bP86448 Snora73a-201ENSMUST00000082453 205 ntBASIC12.75□□□□□ -0.37
Trim43bP86448 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim43bP86448 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim43bP86448 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43bP86448 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim43bP86448 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.74□□□□□ -0.37
Trim43bP86448 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.74□□□□□ -0.37
Trim43bP86448 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trim43bP86448 Gm13369-201ENSMUST00000119442 987 ntBASIC12.74□□□□□ -0.37
Trim43bP86448 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Gm16379-201ENSMUST00000161469 348 ntBASIC12.74□□□□□ -0.37
Trim43bP86448 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.74□□□□□ -0.37
Trim43bP86448 Gm8762-201ENSMUST00000193486 339 ntBASIC12.74□□□□□ -0.37
Trim43bP86448 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Trim43bP86448 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim43bP86448 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.74□□□□□ -0.37
Trim43bP86448 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim43bP86448 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim43bP86448 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Trim43bP86448 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Trim43bP86448 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trim43bP86448 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim43bP86448 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.73□□□□□ -0.37
Trim43bP86448 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Gm12291-201ENSMUST00000121627 311 ntBASIC12.73□□□□□ -0.37
Trim43bP86448 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.73□□□□□ -0.37
Trim43bP86448 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim43bP86448 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.73□□□□□ -0.37
Trim43bP86448 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trim43bP86448 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Trim43bP86448 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim43bP86448 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.73□□□□□ -0.37
Trim43bP86448 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms