Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SgcbP82349 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SgcbP82349 Gm24231-201ENSMUST00000104315 133 ntBASIC11.07□□□□□ -0.64
SgcbP82349 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SgcbP82349 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.07□□□□□ -0.64
SgcbP82349 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SgcbP82349 Gm14726-201ENSMUST00000120623 896 ntBASIC11.07□□□□□ -0.64
SgcbP82349 Gm13570-201ENSMUST00000140763 309 ntBASIC11.07□□□□□ -0.64
SgcbP82349 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SgcbP82349 Gm20482-202ENSMUST00000174729 825 ntBASIC11.07□□□□□ -0.64
SgcbP82349 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.07□□□□□ -0.64
SgcbP82349 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.07□□□□□ -0.64
SgcbP82349 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.07□□□□□ -0.64
SgcbP82349 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.07□□□□□ -0.64
SgcbP82349 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SgcbP82349 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SgcbP82349 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Gm15547-201ENSMUST00000122152 333 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.06□□□□□ -0.64
SgcbP82349 Gm7584-201ENSMUST00000175829 940 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Gm9022-201ENSMUST00000182482 992 ntBASIC11.06□□□□□ -0.64
SgcbP82349 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.06□□□□□ -0.64
SgcbP82349 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.06□□□□□ -0.64
SgcbP82349 Gm43084-201ENSMUST00000200696 947 ntBASIC11.06□□□□□ -0.64
SgcbP82349 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.06□□□□□ -0.64
SgcbP82349 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.06□□□□□ -0.64
SgcbP82349 AC124408.1-201ENSMUST00000228938 707 ntBASIC11.06□□□□□ -0.64
SgcbP82349 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Gm26035-201ENSMUST00000083065 308 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SgcbP82349 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.06□□□□□ -0.64
SgcbP82349 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
SgcbP82349 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
SgcbP82349 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.06□□□□□ -0.64
SgcbP82349 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
SgcbP82349 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SgcbP82349 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
SgcbP82349 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SgcbP82349 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms