Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atf1P81269 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Atf1P81269 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atf1P81269 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Atf1P81269 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.71□□□□□ -0.69
Atf1P81269 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Atf1P81269 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Atf1P81269 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Atf1P81269 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Atf1P81269 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Atf1P81269 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Atf1P81269 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Atf1P81269 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
Atf1P81269 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Atf1P81269 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Atf1P81269 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.71□□□□□ -0.7
Atf1P81269 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Atf1P81269 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.7□□□□□ -0.7
Atf1P81269 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Atf1P81269 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Atf1P81269 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.7□□□□□ -0.7
Atf1P81269 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.7□□□□□ -0.7
Atf1P81269 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Atf1P81269 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.7□□□□□ -0.7
Atf1P81269 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.7□□□□□ -0.7
Atf1P81269 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.7□□□□□ -0.7
Atf1P81269 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.7□□□□□ -0.7
Atf1P81269 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC10.7□□□□□ -0.7
Atf1P81269 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Gm17150-201ENSMUST00000165577 381 ntBASIC10.7□□□□□ -0.7
Atf1P81269 Gm6222-202ENSMUST00000182143 629 ntBASIC10.7□□□□□ -0.7
Atf1P81269 Gm8602-201ENSMUST00000184045 607 ntBASIC10.7□□□□□ -0.7
Atf1P81269 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC10.7□□□□□ -0.7
Atf1P81269 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.7□□□□□ -0.7
Atf1P81269 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC10.7□□□□□ -0.7
Atf1P81269 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Atf1P81269 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.7□□□□□ -0.7
Atf1P81269 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Atf1P81269 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
Atf1P81269 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Atf1P81269 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.69□□□□□ -0.7
Atf1P81269 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.69□□□□□ -0.7
Atf1P81269 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.69□□□□□ -0.7
Atf1P81269 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
Atf1P81269 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Gm11424-201ENSMUST00000121929 829 ntBASIC10.69□□□□□ -0.7
Atf1P81269 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Gm7809-201ENSMUST00000153199 742 ntBASIC10.69□□□□□ -0.7
Atf1P81269 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
Atf1P81269 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Atf1P81269 Gm3890-201ENSMUST00000182416 207 ntBASIC10.69□□□□□ -0.7
Atf1P81269 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.69□□□□□ -0.7
Atf1P81269 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.69□□□□□ -0.7
Atf1P81269 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.69□□□□□ -0.7
Atf1P81269 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.69□□□□□ -0.7
Atf1P81269 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.69□□□□□ -0.7
Atf1P81269 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.69□□□□□ -0.7
Atf1P81269 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Atf1P81269 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Atf1P81269 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms