Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CiitaP79621 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.4□□□□□ -0.26
CiitaP79621 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Gm11989-201ENSMUST00000117240 672 ntBASIC13.4□□□□□ -0.26
CiitaP79621 Gm11362-201ENSMUST00000118838 850 ntBASIC13.4□□□□□ -0.26
CiitaP79621 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Gm5616-201ENSMUST00000165252 384 ntBASIC13.4□□□□□ -0.26
CiitaP79621 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.4□□□□□ -0.26
CiitaP79621 Gm8741-201ENSMUST00000174736 384 ntBASIC13.4□□□□□ -0.26
CiitaP79621 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Gm18827-201ENSMUST00000188341 790 ntBASIC13.4□□□□□ -0.26
CiitaP79621 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Gm8385-201ENSMUST00000058999 643 ntBASIC13.4□□□□□ -0.26
CiitaP79621 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CiitaP79621 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CiitaP79621 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.4□□□□□ -0.26
CiitaP79621 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.4□□□□□ -0.26
CiitaP79621 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CiitaP79621 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.4□□□□□ -0.26
CiitaP79621 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CiitaP79621 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CiitaP79621 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CiitaP79621 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CiitaP79621 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.39□□□□□ -0.27
CiitaP79621 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
CiitaP79621 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CiitaP79621 Rprl1-201ENSMUST00000158050 327 ntBASIC13.39□□□□□ -0.27
CiitaP79621 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CiitaP79621 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.39□□□□□ -0.27
CiitaP79621 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.39□□□□□ -0.27
CiitaP79621 Gm26461-201ENSMUST00000175064 290 ntBASIC13.39□□□□□ -0.27
CiitaP79621 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CiitaP79621 Gm44882-201ENSMUST00000205702 802 ntBASIC13.39□□□□□ -0.27
CiitaP79621 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.39□□□□□ -0.27
CiitaP79621 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.39□□□□□ -0.27
CiitaP79621 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.39□□□□□ -0.27
CiitaP79621 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CiitaP79621 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.39□□□□□ -0.27
CiitaP79621 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.39□□□□□ -0.27
CiitaP79621 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CiitaP79621 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.39□□□□□ -0.27
CiitaP79621 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CiitaP79621 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CiitaP79621 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.38□□□□□ -0.27
CiitaP79621 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CiitaP79621 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms