Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ldb1P70662 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Ldb1P70662 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.32□□□□□ -0.44
Ldb1P70662 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ldb1P70662 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ldb1P70662 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ldb1P70662 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ldb1P70662 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Gm9083-201ENSMUST00000120423 819 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.31□□□□□ -0.44
Ldb1P70662 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ldb1P70662 AY702102-202ENSMUST00000194651 1173 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.31□□□□□ -0.44
Ldb1P70662 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ldb1P70662 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ldb1P70662 Gm24136-201ENSMUST00000083374 165 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Ldb1P70662 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.31□□□□□ -0.44
Ldb1P70662 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ldb1P70662 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.31□□□□□ -0.44
Ldb1P70662 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.3□□□□□ -0.44
Ldb1P70662 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Gm12314-201ENSMUST00000118104 538 ntBASIC12.3□□□□□ -0.44
Ldb1P70662 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.3□□□□□ -0.44
Ldb1P70662 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ldb1P70662 Gm18054-201ENSMUST00000207539 555 ntBASIC12.3□□□□□ -0.44
Ldb1P70662 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.3□□□□□ -0.44
Ldb1P70662 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.3□□□□□ -0.44
Ldb1P70662 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ldb1P70662 Gm10076-201ENSMUST00000073238 384 ntBASIC12.3□□□□□ -0.44
Ldb1P70662 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ldb1P70662 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ldb1P70662 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ldb1P70662 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ldb1P70662 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ldb1P70662 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb1P70662 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.29□□□□□ -0.44
Ldb1P70662 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.29□□□□□ -0.44
Ldb1P70662 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ldb1P70662 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms