Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.71□□□□□ -0.37
Msx3P70354 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.71□□□□□ -0.37
Msx3P70354 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.71□□□□□ -0.37
Msx3P70354 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.71□□□□□ -0.37
Msx3P70354 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.71□□□□□ -0.37
Msx3P70354 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Msx3P70354 Gm18187-201ENSMUST00000196476 984 ntBASIC12.71□□□□□ -0.37
Msx3P70354 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.71□□□□□ -0.37
Msx3P70354 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.71□□□□□ -0.37
Msx3P70354 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Msx3P70354 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Msx3P70354 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Msx3P70354 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Msx3P70354 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.71□□□□□ -0.38
Msx3P70354 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Msx3P70354 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Msx3P70354 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Msx3P70354 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Msx3P70354 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Msx3P70354 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Msx3P70354 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Msx3P70354 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Gm6023-201ENSMUST00000118217 606 ntBASIC12.7□□□□□ -0.38
Msx3P70354 Gm14999-201ENSMUST00000121039 624 ntBASIC12.7□□□□□ -0.38
Msx3P70354 Gm35960-201ENSMUST00000202712 767 ntBASIC12.7□□□□□ -0.38
Msx3P70354 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.7□□□□□ -0.38
Msx3P70354 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Msx3P70354 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.7□□□□□ -0.38
Msx3P70354 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.7□□□□□ -0.38
Msx3P70354 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.7□□□□□ -0.38
Msx3P70354 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Msx3P70354 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Msx3P70354 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Msx3P70354 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.69□□□□□ -0.38
Msx3P70354 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.69□□□□□ -0.38
Msx3P70354 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Msx3P70354 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Msx3P70354 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Gm10434-201ENSMUST00000101158 471 ntBASIC12.69□□□□□ -0.38
Msx3P70354 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.69□□□□□ -0.38
Msx3P70354 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.69□□□□□ -0.38
Msx3P70354 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Msx3P70354 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.69□□□□□ -0.38
Msx3P70354 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.69□□□□□ -0.38
Msx3P70354 Gm5745-201ENSMUST00000183748 313 ntBASIC12.69□□□□□ -0.38
Msx3P70354 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.69□□□□□ -0.38
Msx3P70354 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Msx3P70354 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms