Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Gabra1P62812 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Gabra1P62812 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gabra1P62812 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Gabra1P62812 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Gabra1P62812 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Gabra1P62812 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
Gabra1P62812 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Gabra1P62812 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.41□□□□□ -0.74
Gabra1P62812 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm12291-201ENSMUST00000121627 311 ntBASIC10.41□□□□□ -0.74
Gabra1P62812 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.41□□□□□ -0.74
Gabra1P62812 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.41□□□□□ -0.74
Gabra1P62812 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Gabra1P62812 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.41□□□□□ -0.74
Gabra1P62812 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Gabra1P62812 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Gabra1P62812 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.41□□□□□ -0.74
Gabra1P62812 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gabra1P62812 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Gabra1P62812 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.4□□□□□ -0.74
Gabra1P62812 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.4□□□□□ -0.74
Gabra1P62812 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Gm9522-201ENSMUST00000182394 926 ntBASIC10.4□□□□□ -0.74
Gabra1P62812 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.4□□□□□ -0.74
Gabra1P62812 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Gm38223-201ENSMUST00000194484 695 ntBASIC10.4□□□□□ -0.74
Gabra1P62812 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Gabra1P62812 Gm8396-201ENSMUST00000057361 823 ntBASIC10.4□□□□□ -0.74
Gabra1P62812 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.4□□□□□ -0.74
Gabra1P62812 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gabra1P62812 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
Gabra1P62812 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Gabra1P62812 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms