Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.98□□□□□ -0.81
Lmo4P61969 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Lmo4P61969 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Lmo4P61969 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Lmo4P61969 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm13045-201ENSMUST00000119019 712 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Gm12501-201ENSMUST00000119163 529 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Gm11941-201ENSMUST00000119904 610 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm24514-201ENSMUST00000174961 285 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm19353-201ENSMUST00000184561 445 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Gm44882-201ENSMUST00000205702 802 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm4157-201ENSMUST00000211647 679 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Gm14267-206ENSMUST00000226870 1209 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Lmo4P61969 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.97□□□□□ -0.81
Lmo4P61969 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Lmo4P61969 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Lmo4P61969 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Lmo4P61969 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Lmo4P61969 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Lmo4P61969 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Lmo4P61969 Gm12165-201ENSMUST00000117047 342 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Lmo4P61969 Mir1943-201ENSMUST00000158276 73 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Gm9550-201ENSMUST00000161130 862 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.96□□□□□ -0.82
Lmo4P61969 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.96□□□□□ -0.82
Lmo4P61969 Gm9630-201ENSMUST00000178304 885 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.96□□□□□ -0.82
Lmo4P61969 Gm5733-201ENSMUST00000190232 939 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Gm4482-201ENSMUST00000200876 742 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms