Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.79□□□□□ -0.2
Tpm1P58771 Gm5867-201ENSMUST00000063197 592 ntBASIC13.79□□□□□ -0.2
Tpm1P58771 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.79□□□□□ -0.2
Tpm1P58771 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tpm1P58771 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.79□□□□□ -0.2
Tpm1P58771 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tpm1P58771 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Tpm1P58771 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tpm1P58771 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Tpm1P58771 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.78□□□□□ -0.2
Tpm1P58771 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.78□□□□□ -0.2
Tpm1P58771 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Mir7023-201ENSMUST00000185093 64 ntBASIC13.78□□□□□ -0.2
Tpm1P58771 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.78□□□□□ -0.2
Tpm1P58771 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.78□□□□□ -0.2
Tpm1P58771 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Tpm1P58771 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tpm1P58771 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.78□□□□□ -0.2
Tpm1P58771 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tpm1P58771 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.78□□□□□ -0.2
Tpm1P58771 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tpm1P58771 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tpm1P58771 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tpm1P58771 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tpm1P58771 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Tpm1P58771 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tpm1P58771 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.77□□□□□ -0.21
Tpm1P58771 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.77□□□□□ -0.21
Tpm1P58771 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.77□□□□□ -0.21
Tpm1P58771 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.77□□□□□ -0.21
Tpm1P58771 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.77□□□□□ -0.21
Tpm1P58771 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.77□□□□□ -0.21
Tpm1P58771 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tpm1P58771 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.77□□□□□ -0.21
Tpm1P58771 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tpm1P58771 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tpm1P58771 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Tpm1P58771 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.76□□□□□ -0.21
Tpm1P58771 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tpm1P58771 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.76□□□□□ -0.21
Tpm1P58771 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms