Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Lim2P56563 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lim2P56563 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.37□□□□□ -0.43
Lim2P56563 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.37□□□□□ -0.43
Lim2P56563 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Lim2P56563 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Gm22323-201ENSMUST00000103832 109 ntBASIC12.37□□□□□ -0.43
Lim2P56563 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Gm13570-201ENSMUST00000140763 309 ntBASIC12.37□□□□□ -0.43
Lim2P56563 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Gm37259-201ENSMUST00000193903 849 ntBASIC12.37□□□□□ -0.43
Lim2P56563 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.37□□□□□ -0.43
Lim2P56563 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.37□□□□□ -0.43
Lim2P56563 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.37□□□□□ -0.43
Lim2P56563 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Lim2P56563 Pck2-205ENSMUST00000226352 2784 ntBASIC12.37□□□□□ -0.43
Lim2P56563 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lim2P56563 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lim2P56563 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.37□□□□□ -0.43
Lim2P56563 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lim2P56563 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lim2P56563 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.36□□□□□ -0.43
Lim2P56563 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lim2P56563 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lim2P56563 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Gm23270-201ENSMUST00000104055 131 ntBASIC12.36□□□□□ -0.43
Lim2P56563 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Lim2P56563 Gm9022-201ENSMUST00000182482 992 ntBASIC12.36□□□□□ -0.43
Lim2P56563 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.36□□□□□ -0.43
Lim2P56563 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Lim2P56563 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lim2P56563 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.36□□□□□ -0.43
Lim2P56563 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Lim2P56563 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Lim2P56563 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Lim2P56563 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lim2P56563 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Lim2P56563 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lim2P56563 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.35□□□□□ -0.43
Lim2P56563 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lim2P56563 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lim2P56563 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.35□□□□□ -0.43
Lim2P56563 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.35□□□□□ -0.43
Lim2P56563 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.35□□□□□ -0.43
Lim2P56563 Gm20482-202ENSMUST00000174729 825 ntBASIC12.35□□□□□ -0.43
Lim2P56563 Gm27243-201ENSMUST00000183964 521 ntBASIC12.35□□□□□ -0.43
Lim2P56563 Gm27320-201ENSMUST00000184892 109 ntBASIC12.35□□□□□ -0.43
Lim2P56563 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.35□□□□□ -0.43
Lim2P56563 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.35□□□□□ -0.43
Lim2P56563 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lim2P56563 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms