Protein–RNA interactions for Protein: P56481

Cckbr, Gastrin/cholecystokinin type B receptor, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CckbrP56481 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.49□□□□□ -0.57
CckbrP56481 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CckbrP56481 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CckbrP56481 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.48□□□□□ -0.57
CckbrP56481 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.48□□□□□ -0.57
CckbrP56481 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CckbrP56481 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CckbrP56481 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CckbrP56481 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CckbrP56481 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CckbrP56481 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CckbrP56481 Gm15370-201ENSMUST00000117158 253 ntBASIC11.48□□□□□ -0.57
CckbrP56481 Gm14999-201ENSMUST00000121039 624 ntBASIC11.48□□□□□ -0.57
CckbrP56481 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.48□□□□□ -0.57
CckbrP56481 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.48□□□□□ -0.57
CckbrP56481 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.48□□□□□ -0.57
CckbrP56481 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.48□□□□□ -0.57
CckbrP56481 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.48□□□□□ -0.57
CckbrP56481 Gm18304-201ENSMUST00000189162 546 ntBASIC11.48□□□□□ -0.57
CckbrP56481 Gm38266-201ENSMUST00000194931 421 ntBASIC11.48□□□□□ -0.57
CckbrP56481 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.48□□□□□ -0.57
CckbrP56481 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.48□□□□□ -0.57
CckbrP56481 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.48□□□□□ -0.57
CckbrP56481 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CckbrP56481 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.48□□□□□ -0.57
CckbrP56481 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CckbrP56481 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CckbrP56481 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.48□□□□□ -0.57
CckbrP56481 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.48□□□□□ -0.57
CckbrP56481 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.48□□□□□ -0.57
CckbrP56481 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CckbrP56481 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CckbrP56481 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CckbrP56481 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CckbrP56481 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.47□□□□□ -0.57
CckbrP56481 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CckbrP56481 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.47□□□□□ -0.57
CckbrP56481 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CckbrP56481 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.47□□□□□ -0.57
CckbrP56481 Gm13875-201ENSMUST00000120162 282 ntBASIC11.47□□□□□ -0.57
CckbrP56481 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CckbrP56481 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.47□□□□□ -0.57
CckbrP56481 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CckbrP56481 Gm9022-201ENSMUST00000182482 992 ntBASIC11.47□□□□□ -0.57
CckbrP56481 Gm21769-201ENSMUST00000211922 111 ntBASIC11.47□□□□□ -0.57
CckbrP56481 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms