Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.95□□□□□ -0.34
Ephb3P54754 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ephb3P54754 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
Ephb3P54754 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Gm13809-201ENSMUST00000117921 597 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Gm12899-201ENSMUST00000120565 551 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.95□□□□□ -0.34
Ephb3P54754 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.95□□□□□ -0.34
Ephb3P54754 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.95□□□□□ -0.34
Ephb3P54754 Gm4726-201ENSMUST00000135604 736 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Gm6019-201ENSMUST00000148369 736 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC12.95□□□□□ -0.34
Ephb3P54754 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Gm43184-201ENSMUST00000197247 542 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.95□□□□□ -0.34
Ephb3P54754 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ephb3P54754 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ephb3P54754 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ephb3P54754 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.95□□□□□ -0.34
Ephb3P54754 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Ephb3P54754 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ephb3P54754 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Ephb3P54754 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.94□□□□□ -0.34
Ephb3P54754 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.94□□□□□ -0.34
Ephb3P54754 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Gm13047-201ENSMUST00000117116 815 ntBASIC12.94□□□□□ -0.34
Ephb3P54754 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.94□□□□□ -0.34
Ephb3P54754 Gm11246-201ENSMUST00000120880 345 ntBASIC12.94□□□□□ -0.34
Ephb3P54754 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.94□□□□□ -0.34
Ephb3P54754 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.94□□□□□ -0.34
Ephb3P54754 Gm23085-201ENSMUST00000157849 293 ntBASIC12.94□□□□□ -0.34
Ephb3P54754 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.94□□□□□ -0.34
Ephb3P54754 Gm8100-201ENSMUST00000182906 988 ntBASIC12.94□□□□□ -0.34
Ephb3P54754 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.94□□□□□ -0.34
Ephb3P54754 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.94□□□□□ -0.34
Ephb3P54754 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Ephb3P54754 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.94□□□□□ -0.34
Ephb3P54754 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ephb3P54754 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms