Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.36□□□□□ -0.27
Nub1P54729 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Nub1P54729 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Gm12058-201ENSMUST00000118614 437 ntBASIC13.36□□□□□ -0.27
Nub1P54729 Gm4986-201ENSMUST00000119731 549 ntBASIC13.36□□□□□ -0.27
Nub1P54729 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.36□□□□□ -0.27
Nub1P54729 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Nub1P54729 Gm43438-201ENSMUST00000198133 379 ntBASIC13.36□□□□□ -0.27
Nub1P54729 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.36□□□□□ -0.27
Nub1P54729 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.36□□□□□ -0.27
Nub1P54729 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.36□□□□□ -0.27
Nub1P54729 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.36□□□□□ -0.27
Nub1P54729 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Nub1P54729 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.36□□□□□ -0.27
Nub1P54729 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Nub1P54729 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nub1P54729 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.36□□□□□ -0.27
Nub1P54729 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.36□□□□□ -0.27
Nub1P54729 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Nub1P54729 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.36□□□□□ -0.27
Nub1P54729 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nub1P54729 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.35□□□□□ -0.27
Nub1P54729 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Gm12314-201ENSMUST00000118104 538 ntBASIC13.35□□□□□ -0.27
Nub1P54729 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 Gm27243-201ENSMUST00000183964 521 ntBASIC13.35□□□□□ -0.27
Nub1P54729 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.35□□□□□ -0.27
Nub1P54729 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 Gm37489-201ENSMUST00000191883 159 ntBASIC13.35□□□□□ -0.27
Nub1P54729 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.35□□□□□ -0.27
Nub1P54729 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.35□□□□□ -0.27
Nub1P54729 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.35□□□□□ -0.27
Nub1P54729 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.35□□□□□ -0.27
Nub1P54729 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.35□□□□□ -0.27
Nub1P54729 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.35□□□□□ -0.27
Nub1P54729 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nub1P54729 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Nub1P54729 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nub1P54729 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms