Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.38□□□□□ -0.43
Fdft1P53798 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Fdft1P53798 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.37□□□□□ -0.43
Fdft1P53798 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.37□□□□□ -0.43
Fdft1P53798 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.37□□□□□ -0.43
Fdft1P53798 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Fdft1P53798 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.37□□□□□ -0.43
Fdft1P53798 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm25927-201ENSMUST00000175058 117 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Fdft1P53798 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Fdft1P53798 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fdft1P53798 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Fdft1P53798 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.37□□□□□ -0.43
Fdft1P53798 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.36□□□□□ -0.43
Fdft1P53798 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.36□□□□□ -0.43
Fdft1P53798 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Fdft1P53798 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Fdft1P53798 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Gm13829-201ENSMUST00000119600 138 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 Gm13492-201ENSMUST00000119772 665 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 Gm11591-201ENSMUST00000120063 702 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 Gm15703-201ENSMUST00000120250 880 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Fdft1P53798 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 Gm6222-202ENSMUST00000182143 629 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.36□□□□□ -0.43
Fdft1P53798 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fdft1P53798 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms