Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox3P53784 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox3P53784 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox3P53784 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Sox3P53784 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sox3P53784 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox3P53784 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Sox3P53784 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox3P53784 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox3P53784 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Sox3P53784 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Gm25214-201ENSMUST00000104573 129 ntBASIC11.89□□□□□ -0.51
Sox3P53784 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.89□□□□□ -0.51
Sox3P53784 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.89□□□□□ -0.51
Sox3P53784 Gm8194-201ENSMUST00000159783 859 ntBASIC11.89□□□□□ -0.51
Sox3P53784 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Sox3P53784 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.89□□□□□ -0.51
Sox3P53784 Gm44262-201ENSMUST00000204969 372 ntBASIC11.89□□□□□ -0.51
Sox3P53784 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.89□□□□□ -0.51
Sox3P53784 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Sox3P53784 Gm10752-201ENSMUST00000218348 729 ntBASIC11.89□□□□□ -0.51
Sox3P53784 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.89□□□□□ -0.51
Sox3P53784 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sox3P53784 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.89□□□□□ -0.51
Sox3P53784 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox3P53784 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox3P53784 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox3P53784 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox3P53784 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Sox3P53784 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.88□□□□□ -0.51
Sox3P53784 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Sox3P53784 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.88□□□□□ -0.51
Sox3P53784 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.88□□□□□ -0.51
Sox3P53784 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.88□□□□□ -0.51
Sox3P53784 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.88□□□□□ -0.51
Sox3P53784 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox3P53784 Gm6407-201ENSMUST00000176468 549 ntBASIC11.88□□□□□ -0.51
Sox3P53784 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox3P53784 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Sox3P53784 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox3P53784 Gm45219-201ENSMUST00000205602 465 ntBASIC11.88□□□□□ -0.51
Sox3P53784 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.88□□□□□ -0.51
Sox3P53784 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms