Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lbx1P52955 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lbx1P52955 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lbx1P52955 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lbx1P52955 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.02□□□□□ -0.49
Lbx1P52955 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lbx1P52955 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lbx1P52955 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.01□□□□□ -0.49
Lbx1P52955 Gm15595-201ENSMUST00000120840 961 ntBASIC12.01□□□□□ -0.49
Lbx1P52955 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC12.01□□□□□ -0.49
Lbx1P52955 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.01□□□□□ -0.49
Lbx1P52955 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.01□□□□□ -0.49
Lbx1P52955 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.01□□□□□ -0.49
Lbx1P52955 Gm3551-201ENSMUST00000190750 664 ntBASIC12.01□□□□□ -0.49
Lbx1P52955 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.01□□□□□ -0.49
Lbx1P52955 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.01□□□□□ -0.49
Lbx1P52955 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Lbx1P52955 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lbx1P52955 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lbx1P52955 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Lbx1P52955 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Gm12020-201ENSMUST00000119030 2042 ntBASIC12□□□□□ -0.49
Lbx1P52955 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Gm24279-201ENSMUST00000104236 131 ntBASIC12□□□□□ -0.49
Lbx1P52955 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC12□□□□□ -0.49
Lbx1P52955 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12□□□□□ -0.49
Lbx1P52955 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12□□□□□ -0.49
Lbx1P52955 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12□□□□□ -0.49
Lbx1P52955 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12□□□□□ -0.49
Lbx1P52955 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12□□□□□ -0.49
Lbx1P52955 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12□□□□□ -0.49
Lbx1P52955 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12□□□□□ -0.49
Lbx1P52955 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC12□□□□□ -0.49
Lbx1P52955 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12□□□□□ -0.49
Lbx1P52955 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12□□□□□ -0.49
Lbx1P52955 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12□□□□□ -0.49
Lbx1P52955 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12□□□□□ -0.49
Lbx1P52955 Gm18514-201ENSMUST00000218980 436 ntBASIC12□□□□□ -0.49
Lbx1P52955 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12□□□□□ -0.49
Lbx1P52955 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12□□□□□ -0.49
Lbx1P52955 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Lbx1P52955 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Mypopos-202ENSMUST00000205975 2321 ntBASIC12□□□□□ -0.49
Lbx1P52955 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lbx1P52955 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms