Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx3P50481 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx3P50481 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lhx3P50481 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lhx3P50481 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lhx3P50481 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Lhx3P50481 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Gm23912-201ENSMUST00000104687 87 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.51□□□□□ -0.41
Lhx3P50481 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx3P50481 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.51□□□□□ -0.41
Lhx3P50481 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.51□□□□□ -0.41
Lhx3P50481 Gm18711-201ENSMUST00000199341 750 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Gm18056-201ENSMUST00000207670 568 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Gm18061-201ENSMUST00000208350 562 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Gm18063-201ENSMUST00000208529 568 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Gm18052-201ENSMUST00000208750 559 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx3P50481 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lhx3P50481 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx3P50481 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.51□□□□□ -0.41
Lhx3P50481 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lhx3P50481 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Lhx3P50481 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx3P50481 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Lhx3P50481 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lhx3P50481 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lhx3P50481 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Lhx3P50481 Gm13996-201ENSMUST00000118456 430 ntBASIC12.5□□□□□ -0.41
Lhx3P50481 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lhx3P50481 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Lhx3P50481 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.5□□□□□ -0.41
Lhx3P50481 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.5□□□□□ -0.41
Lhx3P50481 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.5□□□□□ -0.41
Lhx3P50481 Gm8913-201ENSMUST00000209491 641 ntBASIC12.5□□□□□ -0.41
Lhx3P50481 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.5□□□□□ -0.41
Lhx3P50481 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.5□□□□□ -0.41
Lhx3P50481 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Lhx3P50481 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.5□□□□□ -0.41
Lhx3P50481 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.5□□□□□ -0.41
Lhx3P50481 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.5□□□□□ -0.41
Lhx3P50481 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx3P50481 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms