Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Gm5257-201ENSMUST00000121823 790 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.64□□□□□ -0.23
Brca1P48754 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Gm24398-201ENSMUST00000157870 109 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.64□□□□□ -0.23
Brca1P48754 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.64□□□□□ -0.23
Brca1P48754 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Gm3726-201ENSMUST00000203110 785 ntBASIC13.64□□□□□ -0.23
Brca1P48754 CT573086.4-201ENSMUST00000226729 342 ntBASIC13.64□□□□□ -0.23
Brca1P48754 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Brca1P48754 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Brca1P48754 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.64□□□□□ -0.23
Brca1P48754 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Brca1P48754 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Brca1P48754 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Brca1P48754 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Brca1P48754 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Gm23272-201ENSMUST00000104053 129 ntBASIC13.63□□□□□ -0.23
Brca1P48754 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.63□□□□□ -0.23
Brca1P48754 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.63□□□□□ -0.23
Brca1P48754 Gm9630-201ENSMUST00000178304 885 ntBASIC13.63□□□□□ -0.23
Brca1P48754 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Brca1P48754 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.63□□□□□ -0.23
Brca1P48754 Gm9136-201ENSMUST00000193368 454 ntBASIC13.63□□□□□ -0.23
Brca1P48754 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Brca1P48754 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Brca1P48754 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.63□□□□□ -0.23
Brca1P48754 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Brca1P48754 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Gm14807-201ENSMUST00000116640 983 ntBASIC13.62□□□□□ -0.23
Brca1P48754 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Gm42433-201ENSMUST00000196806 940 ntBASIC13.62□□□□□ -0.23
Brca1P48754 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Gm5340-201ENSMUST00000203733 880 ntBASIC13.62□□□□□ -0.23
Brca1P48754 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.62□□□□□ -0.23
Brca1P48754 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.62□□□□□ -0.23
Brca1P48754 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.62□□□□□ -0.23
Brca1P48754 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.62□□□□□ -0.23
Brca1P48754 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.62□□□□□ -0.23
Brca1P48754 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Brca1P48754 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Brca1P48754 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.62□□□□□ -0.23
Brca1P48754 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Brca1P48754 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Brca1P48754 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Brca1P48754 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Brca1P48754 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Brca1P48754 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Brca1P48754 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Brca1P48754 Gm15003-201ENSMUST00000118884 446 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms