Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.19□□□□□ -0.62
Rfx3P48381 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Rfx3P48381 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.19□□□□□ -0.62
Rfx3P48381 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.19□□□□□ -0.62
Rfx3P48381 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.19□□□□□ -0.62
Rfx3P48381 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Rfx3P48381 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.19□□□□□ -0.62
Rfx3P48381 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.19□□□□□ -0.62
Rfx3P48381 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.19□□□□□ -0.62
Rfx3P48381 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Rfx3P48381 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.19□□□□□ -0.62
Rfx3P48381 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.19□□□□□ -0.62
Rfx3P48381 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Rfx3P48381 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Rfx3P48381 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Rfx3P48381 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.19□□□□□ -0.62
Rfx3P48381 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.19□□□□□ -0.62
Rfx3P48381 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Rfx3P48381 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.18□□□□□ -0.62
Rfx3P48381 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.18□□□□□ -0.62
Rfx3P48381 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.18□□□□□ -0.62
Rfx3P48381 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.18□□□□□ -0.62
Rfx3P48381 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.18□□□□□ -0.62
Rfx3P48381 Gm4984-201ENSMUST00000115987 360 ntBASIC11.18□□□□□ -0.62
Rfx3P48381 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.18□□□□□ -0.62
Rfx3P48381 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.18□□□□□ -0.62
Rfx3P48381 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.18□□□□□ -0.62
Rfx3P48381 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.18□□□□□ -0.62
Rfx3P48381 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.18□□□□□ -0.62
Rfx3P48381 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.18□□□□□ -0.62
Rfx3P48381 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.18□□□□□ -0.62
Rfx3P48381 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Rfx3P48381 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.18□□□□□ -0.62
Rfx3P48381 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.18□□□□□ -0.62
Rfx3P48381 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rfx3P48381 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Rfx3P48381 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Rfx3P48381 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.17□□□□□ -0.62
Rfx3P48381 Map1b-203ENSMUST00000223725 2669 ntBASIC11.17□□□□□ -0.62
Rfx3P48381 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rfx3P48381 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rfx3P48381 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms