Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.22□□□□□ -0.77
Hist1h1aP43275 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.22□□□□□ -0.77
Hist1h1aP43275 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Gm8805-201ENSMUST00000117848 313 ntBASIC10.22□□□□□ -0.77
Hist1h1aP43275 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Gm9630-201ENSMUST00000178304 885 ntBASIC10.22□□□□□ -0.77
Hist1h1aP43275 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.22□□□□□ -0.77
Hist1h1aP43275 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Gm8598-201ENSMUST00000221184 836 ntBASIC10.22□□□□□ -0.77
Hist1h1aP43275 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.22□□□□□ -0.77
Hist1h1aP43275 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Hist1h1aP43275 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm8213-201ENSMUST00000118191 441 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm26185-201ENSMUST00000157692 266 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm23363-201ENSMUST00000175024 79 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Proscos-202ENSMUST00000178990 666 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm27390-201ENSMUST00000184516 176 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm7063-201ENSMUST00000186840 981 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm8515-201ENSMUST00000194852 576 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm8099-201ENSMUST00000200510 742 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm7287-201ENSMUST00000205267 602 ntBASIC10.21□□□□□ -0.77
Hist1h1aP43275 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Hist1h1aP43275 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Hist1h1aP43275 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hist1h1aP43275 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Hist1h1aP43275 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms