Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.76□□□□□ -0.37
HttP42859 Gm20493-201ENSMUST00000173706 213 ntBASIC12.76□□□□□ -0.37
HttP42859 Gm9644-201ENSMUST00000212828 1183 ntBASIC12.76□□□□□ -0.37
HttP42859 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HttP42859 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.76□□□□□ -0.37
HttP42859 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HttP42859 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HttP42859 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
HttP42859 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
HttP42859 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
HttP42859 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HttP42859 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HttP42859 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Gm22344-201ENSMUST00000122642 278 ntBASIC12.75□□□□□ -0.37
HttP42859 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC12.75□□□□□ -0.37
HttP42859 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.75□□□□□ -0.37
HttP42859 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HttP42859 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.75□□□□□ -0.37
HttP42859 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
HttP42859 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.75□□□□□ -0.37
HttP42859 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.75□□□□□ -0.37
HttP42859 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Gm8968-201ENSMUST00000199133 1303 ntBASIC12.75□□□□□ -0.37
HttP42859 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Gm30055-201ENSMUST00000203175 803 ntBASIC12.75□□□□□ -0.37
HttP42859 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.75□□□□□ -0.37
HttP42859 Gm26782-203ENSMUST00000227103 751 ntBASIC12.75□□□□□ -0.37
HttP42859 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HttP42859 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.74□□□□□ -0.37
HttP42859 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HttP42859 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
HttP42859 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HttP42859 Gm25830-201ENSMUST00000158923 132 ntBASIC12.74□□□□□ -0.37
HttP42859 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.74□□□□□ -0.37
HttP42859 Gm33707-201ENSMUST00000195135 569 ntBASIC12.74□□□□□ -0.37
HttP42859 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HttP42859 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
HttP42859 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.74□□□□□ -0.37
HttP42859 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Gm12736-201ENSMUST00000119330 236 ntBASIC12.74□□□□□ -0.37
HttP42859 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.74□□□□□ -0.37
HttP42859 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Gm43163-201ENSMUST00000196571 442 ntBASIC12.74□□□□□ -0.37
HttP42859 Gm2594-201ENSMUST00000214774 742 ntBASIC12.74□□□□□ -0.37
HttP42859 CT025603.1-201ENSMUST00000224040 448 ntBASIC12.74□□□□□ -0.37
HttP42859 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HttP42859 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HttP42859 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms