Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC8.32□□□□□ -1.08
Rpl28P41105 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Mir692-1-201ENSMUST00000102263 109 ntBASIC8.32□□□□□ -1.08
Rpl28P41105 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC8.32□□□□□ -1.08
Rpl28P41105 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Gm12091-201ENSMUST00000146791 830 ntBASIC8.32□□□□□ -1.08
Rpl28P41105 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Gm7446-201ENSMUST00000221035 1240 ntBASIC8.32□□□□□ -1.08
Rpl28P41105 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
Rpl28P41105 Gm45532-201ENSMUST00000210342 3620 ntBASIC8.32□□□□□ -1.08
Rpl28P41105 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC8.32□□□□□ -1.08
Rpl28P41105 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Rpl28P41105 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl28P41105 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Gm43860-201ENSMUST00000201742 2705 ntBASIC8.31□□□□□ -1.08
Rpl28P41105 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 AC122291.1-201ENSMUST00000228937 5748 ntBASIC8.31□□□□□ -1.08
Rpl28P41105 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC8.31□□□□□ -1.08
Rpl28P41105 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Rpl28P41105 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC8.31□□□□□ -1.08
Rpl28P41105 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl28P41105 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC8.31□□□□□ -1.08
Rpl28P41105 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Rpl28P41105 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Rpl28P41105 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Rpl28P41105 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Gm16202-201ENSMUST00000117532 544 ntBASIC8.31□□□□□ -1.08
Rpl28P41105 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Gm13689-201ENSMUST00000119360 685 ntBASIC8.31□□□□□ -1.08
Rpl28P41105 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC8.31□□□□□ -1.08
Rpl28P41105 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC8.31□□□□□ -1.08
Rpl28P41105 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Rpl28P41105 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Rpl28P41105 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC8.31□□□□□ -1.08
Rpl28P41105 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Rpl28P41105 Gm45668-201ENSMUST00000211271 493 ntBASIC8.31□□□□□ -1.08
Rpl28P41105 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC8.31□□□□□ -1.08
Rpl28P41105 AC135669.1-202ENSMUST00000216742 540 ntBASIC8.31□□□□□ -1.08
Rpl28P41105 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms