Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox6P40645 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox6P40645 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.65□□□□□ -0.55
Sox6P40645 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox6P40645 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.65□□□□□ -0.55
Sox6P40645 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox6P40645 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Sox6P40645 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox6P40645 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Sox6P40645 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.64□□□□□ -0.55
Sox6P40645 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.64□□□□□ -0.55
Sox6P40645 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Sox6P40645 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
Sox6P40645 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox6P40645 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox6P40645 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Gm13829-201ENSMUST00000119600 138 ntBASIC11.64□□□□□ -0.55
Sox6P40645 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.64□□□□□ -0.55
Sox6P40645 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox6P40645 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.64□□□□□ -0.55
Sox6P40645 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox6P40645 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 Gm43818-201ENSMUST00000200605 466 ntBASIC11.64□□□□□ -0.55
Sox6P40645 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox6P40645 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Sox6P40645 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.64□□□□□ -0.55
Sox6P40645 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.64□□□□□ -0.55
Sox6P40645 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Gm10146-201ENSMUST00000072739 309 ntBASIC11.64□□□□□ -0.55
Sox6P40645 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.64□□□□□ -0.55
Sox6P40645 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.64□□□□□ -0.55
Sox6P40645 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.64□□□□□ -0.55
Sox6P40645 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.64□□□□□ -0.55
Sox6P40645 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.64□□□□□ -0.55
Sox6P40645 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Sox6P40645 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Sox6P40645 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.64□□□□□ -0.55
Sox6P40645 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sox6P40645 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox6P40645 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox6P40645 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox6P40645 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Gm11637-201ENSMUST00000120601 592 ntBASIC11.63□□□□□ -0.55
Sox6P40645 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Sox6P40645 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.63□□□□□ -0.55
Sox6P40645 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox6P40645 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.63□□□□□ -0.55
Sox6P40645 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.63□□□□□ -0.55
Sox6P40645 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Sox6P40645 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox6P40645 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 238 ms