Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chd1P40201 Sorbs3-204ENSMUST00000227929 2460 ntBASIC18.11■□□□□ 0.49
Chd1P40201 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd1P40201 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC18.1■□□□□ 0.49
Chd1P40201 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC18.1■□□□□ 0.49
Chd1P40201 Rab3c-202ENSMUST00000223922 2398 ntBASIC18.1■□□□□ 0.49
Chd1P40201 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Chd1P40201 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC18.1■□□□□ 0.49
Chd1P40201 Gm11475-201ENSMUST00000118482 476 ntBASIC18.1■□□□□ 0.49
Chd1P40201 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC18.1■□□□□ 0.49
Chd1P40201 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1P40201 Gm38007-201ENSMUST00000192187 313 ntBASIC18.1■□□□□ 0.49
Chd1P40201 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC18.1■□□□□ 0.49
Chd1P40201 n-R5s71-201ENSMUST00000093668 119 ntBASIC18.1■□□□□ 0.49
Chd1P40201 Gm42970-201ENSMUST00000196407 1352 ntBASIC18.1■□□□□ 0.49
Chd1P40201 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1P40201 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1P40201 AC159810.1-201ENSMUST00000214838 1480 ntBASIC18.1■□□□□ 0.49
Chd1P40201 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1P40201 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chd1P40201 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1P40201 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC18.1■□□□□ 0.49
Chd1P40201 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chd1P40201 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Chd1P40201 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd1P40201 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.1■□□□□ 0.49
Chd1P40201 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC18.09■□□□□ 0.49
Chd1P40201 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chd1P40201 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Mir7051-201ENSMUST00000184167 73 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Chd1P40201 Mir8093-201ENSMUST00000185043 137 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Gm44106-201ENSMUST00000203153 1599 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Gm43966-201ENSMUST00000203301 612 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chd1P40201 AC121357.1-201ENSMUST00000227365 608 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Chd1P40201 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chd1P40201 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Chd1P40201 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chd1P40201 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chd1P40201 AC154262.2-202ENSMUST00000225158 1331 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chd1P40201 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd1P40201 Gm37365-201ENSMUST00000193109 409 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Gm44323-201ENSMUST00000198689 129 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Gm8768-201ENSMUST00000220020 826 ntBASIC18.09■□□□□ 0.49
Chd1P40201 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC18.08■□□□□ 0.49
Chd1P40201 AC238940.1-201ENSMUST00000225106 1858 ntBASIC18.08■□□□□ 0.49
Chd1P40201 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1P40201 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1P40201 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Chd1P40201 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1P40201 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1P40201 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chd1P40201 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC18.08■□□□□ 0.48
Chd1P40201 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Gm24294-201ENSMUST00000158295 277 ntBASIC18.08■□□□□ 0.48
Chd1P40201 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC18.08■□□□□ 0.48
Chd1P40201 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Chd1P40201 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Chd1P40201 Gm33707-201ENSMUST00000195135 569 ntBASIC18.08■□□□□ 0.48
Chd1P40201 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC18.08■□□□□ 0.48
Chd1P40201 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Chd1P40201 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC18.08■□□□□ 0.48
Chd1P40201 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Chd1P40201 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Chd1P40201 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd1P40201 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.07■□□□□ 0.48
Chd1P40201 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Chd1P40201 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd1P40201 Gm22937-201ENSMUST00000103954 131 ntBASIC18.07■□□□□ 0.48
Chd1P40201 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms