Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LdlrP35951 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
LdlrP35951 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
LdlrP35951 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.33□□□□□ -0.44
LdlrP35951 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.33□□□□□ -0.44
LdlrP35951 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
LdlrP35951 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.33□□□□□ -0.44
LdlrP35951 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
LdlrP35951 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.33□□□□□ -0.44
LdlrP35951 Gm16570-201ENSMUST00000161951 436 ntBASIC12.33□□□□□ -0.44
LdlrP35951 Gm37008-201ENSMUST00000195712 319 ntBASIC12.33□□□□□ -0.44
LdlrP35951 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.33□□□□□ -0.44
LdlrP35951 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.33□□□□□ -0.44
LdlrP35951 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.33□□□□□ -0.44
LdlrP35951 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LdlrP35951 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
LdlrP35951 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Gm13342-201ENSMUST00000121055 207 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.32□□□□□ -0.44
LdlrP35951 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Gm16296-201ENSMUST00000159905 325 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Gm26461-201ENSMUST00000175064 290 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Gm37466-201ENSMUST00000195692 652 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 Gm43758-201ENSMUST00000199500 367 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
LdlrP35951 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LdlrP35951 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.32□□□□□ -0.44
LdlrP35951 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
LdlrP35951 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.31□□□□□ -0.44
LdlrP35951 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LdlrP35951 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LdlrP35951 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LdlrP35951 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.31□□□□□ -0.44
LdlrP35951 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
LdlrP35951 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.31□□□□□ -0.44
LdlrP35951 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LdlrP35951 Gm26927-201ENSMUST00000182385 965 ntBASIC12.31□□□□□ -0.44
LdlrP35951 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.31□□□□□ -0.44
LdlrP35951 Gm44364-201ENSMUST00000198368 141 ntBASIC12.31□□□□□ -0.44
LdlrP35951 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.31□□□□□ -0.44
LdlrP35951 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.31□□□□□ -0.44
LdlrP35951 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.31□□□□□ -0.44
LdlrP35951 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
LdlrP35951 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms