Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Gm44056-201ENSMUST00000204623 1427 ntBASIC19.32■□□□□ 0.68
PtprkP35822 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Gm13019-201ENSMUST00000120000 276 ntBASIC19.32■□□□□ 0.68
PtprkP35822 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PtprkP35822 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC19.32■□□□□ 0.68
PtprkP35822 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Gm8459-201ENSMUST00000162504 760 ntBASIC19.32■□□□□ 0.68
PtprkP35822 Mir6407-201ENSMUST00000184510 101 ntBASIC19.32■□□□□ 0.68
PtprkP35822 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC19.32■□□□□ 0.68
PtprkP35822 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Olfr584-201ENSMUST00000098210 964 ntBASIC19.32■□□□□ 0.68
PtprkP35822 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PtprkP35822 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PtprkP35822 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC19.31■□□□□ 0.68
PtprkP35822 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PtprkP35822 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC19.31■□□□□ 0.68
PtprkP35822 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC19.31■□□□□ 0.68
PtprkP35822 Gm9661-201ENSMUST00000221611 1122 ntBASIC19.31■□□□□ 0.68
PtprkP35822 AC166836.1-201ENSMUST00000219933 1795 ntBASIC19.31■□□□□ 0.68
PtprkP35822 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 AC123834.1-201ENSMUST00000225346 2043 ntBASIC19.31■□□□□ 0.68
PtprkP35822 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC19.31■□□□□ 0.68
PtprkP35822 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PtprkP35822 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PtprkP35822 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PtprkP35822 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC19.31■□□□□ 0.68
PtprkP35822 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PtprkP35822 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PtprkP35822 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Gm9192-201ENSMUST00000183221 985 ntBASIC19.3■□□□□ 0.68
PtprkP35822 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC19.3■□□□□ 0.68
PtprkP35822 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC19.3■□□□□ 0.68
PtprkP35822 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PtprkP35822 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
PtprkP35822 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PtprkP35822 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PtprkP35822 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC19.29■□□□□ 0.68
PtprkP35822 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PtprkP35822 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC19.29■□□□□ 0.68
PtprkP35822 Gm14942-201ENSMUST00000119642 336 ntBASIC19.29■□□□□ 0.68
PtprkP35822 Gm12030-201ENSMUST00000121917 223 ntBASIC19.29■□□□□ 0.68
PtprkP35822 Gm8723-201ENSMUST00000166076 820 ntBASIC19.29■□□□□ 0.68
PtprkP35822 Gm8701-201ENSMUST00000169259 874 ntBASIC19.29■□□□□ 0.68
PtprkP35822 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC19.29■□□□□ 0.68
PtprkP35822 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PtprkP35822 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC19.29■□□□□ 0.68
PtprkP35822 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PtprkP35822 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms