Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Apoc1P34928 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Apoc1P34928 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.81□□□□□ -0.68
Apoc1P34928 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.81□□□□□ -0.68
Apoc1P34928 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm27892-201ENSMUST00000185017 106 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.81□□□□□ -0.68
Apoc1P34928 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm19163-201ENSMUST00000223313 780 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm10146-201ENSMUST00000072739 309 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Apoc1P34928 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.81□□□□□ -0.68
Apoc1P34928 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Apoc1P34928 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Apoc1P34928 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Apoc1P34928 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.81□□□□□ -0.68
Apoc1P34928 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.8□□□□□ -0.68
Apoc1P34928 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Apoc1P34928 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.8□□□□□ -0.68
Apoc1P34928 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Apoc1P34928 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.8□□□□□ -0.68
Apoc1P34928 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.8□□□□□ -0.68
Apoc1P34928 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.8□□□□□ -0.68
Apoc1P34928 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Apoc1P34928 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.8□□□□□ -0.68
Apoc1P34928 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.8□□□□□ -0.68
Apoc1P34928 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.8□□□□□ -0.68
Apoc1P34928 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.8□□□□□ -0.68
Apoc1P34928 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Apoc1P34928 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.8□□□□□ -0.68
Apoc1P34928 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Apoc1P34928 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Apoc1P34928 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Apoc1P34928 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.8□□□□□ -0.68
Apoc1P34928 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms