Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd28P31041 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Cd28P31041 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd28P31041 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd28P31041 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd28P31041 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd28P31041 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd28P31041 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.89□□□□□ -0.67
Cd28P31041 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd28P31041 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Cd28P31041 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.88□□□□□ -0.67
Cd28P31041 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
Cd28P31041 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.88□□□□□ -0.67
Cd28P31041 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.88□□□□□ -0.67
Cd28P31041 Gm18473-201ENSMUST00000220543 868 ntBASIC10.88□□□□□ -0.67
Cd28P31041 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Cd28P31041 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cd28P31041 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cd28P31041 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.88□□□□□ -0.67
Cd28P31041 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd28P31041 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Cd28P31041 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.87□□□□□ -0.67
Cd28P31041 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cd28P31041 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cd28P31041 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.87□□□□□ -0.67
Cd28P31041 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cd28P31041 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Cd28P31041 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Gm11618-201ENSMUST00000117946 267 ntBASIC10.87□□□□□ -0.67
Cd28P31041 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC10.87□□□□□ -0.67
Cd28P31041 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.87□□□□□ -0.67
Cd28P31041 Gm8099-201ENSMUST00000200510 742 ntBASIC10.87□□□□□ -0.67
Cd28P31041 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cd28P31041 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cd28P31041 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cd28P31041 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cd28P31041 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.87□□□□□ -0.67
Cd28P31041 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cd28P31041 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.86□□□□□ -0.67
Cd28P31041 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms