Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.39□□□□□ -0.59
Nedd8P29595 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.39□□□□□ -0.59
Nedd8P29595 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Nedd8P29595 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nedd8P29595 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nedd8P29595 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Nedd8P29595 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Nedd8P29595 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nedd8P29595 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.38□□□□□ -0.59
Nedd8P29595 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.38□□□□□ -0.59
Nedd8P29595 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.38□□□□□ -0.59
Nedd8P29595 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.38□□□□□ -0.59
Nedd8P29595 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Nedd8P29595 Gm27622-201ENSMUST00000183779 60 ntBASIC11.38□□□□□ -0.59
Nedd8P29595 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.38□□□□□ -0.59
Nedd8P29595 Gm21362-201ENSMUST00000194272 928 ntBASIC11.38□□□□□ -0.59
Nedd8P29595 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.38□□□□□ -0.59
Nedd8P29595 Gm5779-201ENSMUST00000218467 910 ntBASIC11.38□□□□□ -0.59
Nedd8P29595 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Nedd8P29595 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Nedd8P29595 Mir339-201ENSMUST00000083659 96 ntBASIC11.38□□□□□ -0.59
Nedd8P29595 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Btrc-209ENSMUST00000224478 2194 ntBASIC11.38□□□□□ -0.59
Nedd8P29595 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Nedd8P29595 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Nedd8P29595 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
Nedd8P29595 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Nedd8P29595 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Nedd8P29595 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm22065-201ENSMUST00000103753 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm22066-201ENSMUST00000103761 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm24932-201ENSMUST00000103763 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm24115-201ENSMUST00000103799 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm22190-201ENSMUST00000103827 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm22191-201ENSMUST00000103831 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm24721-201ENSMUST00000103849 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm28018-201ENSMUST00000103869 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm26399-201ENSMUST00000103937 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Mir1895-201ENSMUST00000122615 79 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Nedd8P29595 Gm25349-201ENSMUST00000177728 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm23616-201ENSMUST00000177797 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm25871-201ENSMUST00000177816 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm24752-201ENSMUST00000178240 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm24496-201ENSMUST00000178287 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm25649-201ENSMUST00000178476 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm25548-201ENSMUST00000178681 110 ntBASIC11.37□□□□□ -0.59
Nedd8P29595 Gm23147-201ENSMUST00000178841 110 ntBASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms