Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Vcam1P29533 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.17□□□□□ -0.14
Vcam1P29533 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.17□□□□□ -0.14
Vcam1P29533 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcam1P29533 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Vcam1P29533 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vcam1P29533 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vcam1P29533 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.16□□□□□ -0.14
Vcam1P29533 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Vcam1P29533 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.16□□□□□ -0.14
Vcam1P29533 Gm37835-201ENSMUST00000193305 361 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 Gm2965-201ENSMUST00000198365 343 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 Gm5051-201ENSMUST00000204085 485 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 AC166992.1-201ENSMUST00000216356 565 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 AC121960.1-201ENSMUST00000227982 564 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vcam1P29533 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Rubie-203ENSMUST00000227803 2430 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.16□□□□□ -0.14
Vcam1P29533 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Vcam1P29533 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcam1P29533 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.15□□□□□ -0.14
Vcam1P29533 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Vcam1P29533 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.15□□□□□ -0.14
Vcam1P29533 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vcam1P29533 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Vcam1P29533 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.15□□□□□ -0.14
Vcam1P29533 Gm5705-201ENSMUST00000066241 711 ntBASIC14.15□□□□□ -0.14
Vcam1P29533 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcam1P29533 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
Vcam1P29533 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Vcam1P29533 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.14□□□□□ -0.15
Vcam1P29533 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.14□□□□□ -0.15
Vcam1P29533 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.14□□□□□ -0.15
Vcam1P29533 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms