Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Mmp3P28862 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.22□□□□□ -0.29
Mmp3P28862 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Mmp3P28862 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.21□□□□□ -0.29
Mmp3P28862 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Gm11450-201ENSMUST00000121144 333 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.21□□□□□ -0.29
Mmp3P28862 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.21□□□□□ -0.29
Mmp3P28862 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Gm8959-201ENSMUST00000213150 571 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Gm270-201ENSMUST00000223010 976 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Spcs1-203ENSMUST00000226374 592 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Mmp3P28862 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp3P28862 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Mmp3P28862 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Mmp3P28862 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.21□□□□□ -0.29
Mmp3P28862 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.21□□□□□ -0.3
Mmp3P28862 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp3P28862 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Mmp3P28862 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Mmp3P28862 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Mmp3P28862 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.2□□□□□ -0.3
Mmp3P28862 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Mmp3P28862 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.2□□□□□ -0.3
Mmp3P28862 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.2□□□□□ -0.3
Mmp3P28862 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.2□□□□□ -0.3
Mmp3P28862 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.2□□□□□ -0.3
Mmp3P28862 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.2□□□□□ -0.3
Mmp3P28862 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.2□□□□□ -0.3
Mmp3P28862 Mir7677-201ENSMUST00000184226 67 ntBASIC13.2□□□□□ -0.3
Mmp3P28862 Gm18711-201ENSMUST00000199341 750 ntBASIC13.2□□□□□ -0.3
Mmp3P28862 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.2□□□□□ -0.3
Mmp3P28862 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.2□□□□□ -0.3
Mmp3P28862 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
Mmp3P28862 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Mmp3P28862 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Mmp3P28862 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp3P28862 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.19□□□□□ -0.3
Mmp3P28862 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp3P28862 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp3P28862 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms