Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.74□□□□□ -0.37
Nfkb1P25799 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.74□□□□□ -0.37
Nfkb1P25799 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.74□□□□□ -0.37
Nfkb1P25799 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Gm7857-201ENSMUST00000117957 358 ntBASIC12.74□□□□□ -0.37
Nfkb1P25799 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Gm4909-201ENSMUST00000118749 794 ntBASIC12.74□□□□□ -0.37
Nfkb1P25799 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Mir6927-201ENSMUST00000184494 71 ntBASIC12.74□□□□□ -0.37
Nfkb1P25799 Gm28450-201ENSMUST00000187349 638 ntBASIC12.74□□□□□ -0.37
Nfkb1P25799 Gm32999-201ENSMUST00000192693 562 ntBASIC12.74□□□□□ -0.37
Nfkb1P25799 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nfkb1P25799 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nfkb1P25799 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.73□□□□□ -0.37
Nfkb1P25799 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Gm14644-201ENSMUST00000116671 647 ntBASIC12.73□□□□□ -0.37
Nfkb1P25799 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Gm19187-201ENSMUST00000206781 892 ntBASIC12.73□□□□□ -0.37
Nfkb1P25799 Gm45433-201ENSMUST00000209386 247 ntBASIC12.73□□□□□ -0.37
Nfkb1P25799 Gm19208-201ENSMUST00000213861 912 ntBASIC12.73□□□□□ -0.37
Nfkb1P25799 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.73□□□□□ -0.37
Nfkb1P25799 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nfkb1P25799 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.72□□□□□ -0.37
Nfkb1P25799 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.72□□□□□ -0.37
Nfkb1P25799 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nfkb1P25799 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms