Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm43677-201ENSMUST00000198098 2378 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm24231-201ENSMUST00000104315 133 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm12502-201ENSMUST00000120197 444 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm16177-201ENSMUST00000120728 718 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm14760-201ENSMUST00000121831 999 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm27682-201ENSMUST00000183930 110 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm38092-201ENSMUST00000195600 653 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm6266-201ENSMUST00000203844 806 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm37437-201ENSMUST00000194451 1937 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Tnfrsf1aP25118 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm12384-201ENSMUST00000119228 919 ntBASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm18584-201ENSMUST00000203098 964 ntBASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Tnfrsf1aP25118 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Tnfrsf1aP25118 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms