Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.56□□□□□ -0.24
Pde6bP23440 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.56□□□□□ -0.24
Pde6bP23440 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pde6bP23440 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pde6bP23440 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.56□□□□□ -0.24
Pde6bP23440 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Gm5070-201ENSMUST00000177599 862 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Gm28882-201ENSMUST00000185504 314 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Gm42997-202ENSMUST00000200321 985 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.56□□□□□ -0.24
Pde6bP23440 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Gm10076-201ENSMUST00000073238 384 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.56□□□□□ -0.24
Pde6bP23440 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.56□□□□□ -0.24
Pde6bP23440 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.56□□□□□ -0.24
Pde6bP23440 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pde6bP23440 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.55□□□□□ -0.24
Pde6bP23440 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Pde6bP23440 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Pde6bP23440 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.55□□□□□ -0.24
Pde6bP23440 Gm14832-201ENSMUST00000121289 322 ntBASIC13.55□□□□□ -0.24
Pde6bP23440 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Gm6963-201ENSMUST00000147879 379 ntBASIC13.55□□□□□ -0.24
Pde6bP23440 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Gm45433-201ENSMUST00000209386 247 ntBASIC13.55□□□□□ -0.24
Pde6bP23440 Gm8913-201ENSMUST00000209491 641 ntBASIC13.55□□□□□ -0.24
Pde6bP23440 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.55□□□□□ -0.24
Pde6bP23440 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pde6bP23440 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pde6bP23440 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pde6bP23440 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pde6bP23440 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.54□□□□□ -0.24
Pde6bP23440 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.54□□□□□ -0.24
Pde6bP23440 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Pde6bP23440 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.54□□□□□ -0.24
Pde6bP23440 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.54□□□□□ -0.24
Pde6bP23440 Gm24845-201ENSMUST00000158034 109 ntBASIC13.54□□□□□ -0.24
Pde6bP23440 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC13.54□□□□□ -0.24
Pde6bP23440 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.54□□□□□ -0.24
Pde6bP23440 Gm32999-201ENSMUST00000192693 562 ntBASIC13.54□□□□□ -0.24
Pde6bP23440 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.54□□□□□ -0.24
Pde6bP23440 Gm45224-201ENSMUST00000208203 414 ntBASIC13.54□□□□□ -0.24
Pde6bP23440 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.54□□□□□ -0.24
Pde6bP23440 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pde6bP23440 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pde6bP23440 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Pde6bP23440 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.54□□□□□ -0.24
Pde6bP23440 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms