Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.54□□□□□ -0.4
VimP20152 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VimP20152 Mir339-201ENSMUST00000083659 96 ntBASIC12.54□□□□□ -0.4
VimP20152 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
VimP20152 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VimP20152 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.54□□□□□ -0.4
VimP20152 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.54□□□□□ -0.4
VimP20152 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VimP20152 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VimP20152 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
VimP20152 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VimP20152 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.53□□□□□ -0.4
VimP20152 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.53□□□□□ -0.4
VimP20152 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
VimP20152 Gm15376-201ENSMUST00000122258 783 ntBASIC12.53□□□□□ -0.4
VimP20152 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.53□□□□□ -0.4
VimP20152 Gm26464-201ENSMUST00000157094 305 ntBASIC12.53□□□□□ -0.4
VimP20152 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.53□□□□□ -0.4
VimP20152 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VimP20152 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VimP20152 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.53□□□□□ -0.4
VimP20152 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.53□□□□□ -0.4
VimP20152 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.53□□□□□ -0.4
VimP20152 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.53□□□□□ -0.4
VimP20152 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VimP20152 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
VimP20152 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
VimP20152 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VimP20152 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VimP20152 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VimP20152 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VimP20152 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
VimP20152 Gm15693-201ENSMUST00000120470 637 ntBASIC12.52□□□□□ -0.41
VimP20152 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC12.52□□□□□ -0.41
VimP20152 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
VimP20152 Gm44344-201ENSMUST00000200287 129 ntBASIC12.52□□□□□ -0.41
VimP20152 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
VimP20152 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.52□□□□□ -0.41
VimP20152 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.52□□□□□ -0.41
VimP20152 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.52□□□□□ -0.41
VimP20152 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VimP20152 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
VimP20152 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VimP20152 Gm25144-201ENSMUST00000179561 110 ntBASIC12.51□□□□□ -0.41
VimP20152 Gm25352-201ENSMUST00000179815 110 ntBASIC12.51□□□□□ -0.41
VimP20152 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms